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Add devcontainer for development purposes (#7102) 

This change adds a devcontainer configuration to the Citus project. This
devcontainer allows for quick generation of isolated development
environments, either local on the machine of a developer or in a cloud,
like github codepaces.

The devcontainer is updated automatically by github actions when its
configuration changes.

For more detailed instructions on how to quickstart the development in a
container see CONTRIBUTING.md
pull/7229/head
Nils Dijk 2023-10-09 15:37:21 +02:00 committed by GitHub
parent 6d8725efb0
commit 76fdfa3c0f
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# gdbpg.py contains scripts to nicely print the postgres datastructures
# while in a gdb session. Since the vscode debugger is based on gdb this
# actually also works when debugging with vscode. Providing nice tools
# to understand the internal datastructures we are working with.
source /root/gdbpg.py

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postgresql-*.tar.bz2

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\timing on
\pset linestyle unicode
\pset border 2
\setenv PAGER 'pspg --no-mouse -bX --no-commandbar --no-topbar'
\set HISTSIZE 100000
\set PROMPT1 '\n%[%033[1m%]%M %n@%/:%>-%p%R%[%033[0m%]%# '
\set PROMPT2 ' '

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[[source]]
url = "https://pypi.org/simple"
verify_ssl = true
name = "pypi"
[packages]
docopt = "*"
[dev-packages]
[requires]
python_version = "3.9"

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{
"_meta": {
"hash": {
"sha256": "6956a6700ead5804aa56bd597c93bb4a13f208d2d49d3b5399365fd240ca0797"
},
"pipfile-spec": 6,
"requires": {
"python_version": "3.9"
},
"sources": [
{
"name": "pypi",
"url": "https://pypi.org/simple",
"verify_ssl": true
}
]
},
"default": {
"docopt": {
"hashes": [
"sha256:49b3a825280bd66b3aa83585ef59c4a8c82f2c8a522dbe754a8bc8d08c85c491"
],
"index": "pypi",
"version": "==0.6.2"
}
},
"develop": {}
}

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.devcontainer/.vscode/generate_c_cpp_properties-json.py vendored Executable file
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#! /usr/bin/env pipenv-shebang
"""Generate C/C++ properties file for VSCode.
Uses pgenv to iterate postgres versions and generate
a C/C++ properties file for VSCode containing the
include paths for the postgres headers.
Usage:
generate_c_cpp_properties-json.py <target_path>
generate_c_cpp_properties-json.py (-h | --help)
generate_c_cpp_properties-json.py --version
Options:
-h --help Show this screen.
--version Show version.
"""
import json
import subprocess
from docopt import docopt
def main(args):
target_path = args['<target_path>']
output = subprocess.check_output(['pgenv', 'versions'])
# typical output is:
# 14.8 pgsql-14.8
# * 15.3 pgsql-15.3
# 16beta2 pgsql-16beta2
# where the line marked with a * is the currently active version
#
# we are only interested in the first word of each line, which is the version number
# thus we strip the whitespace and the * from the line and split it into words
# and take the first word
versions = [line.strip('* ').split()[0] for line in output.decode('utf-8').splitlines()]
# create the list of configurations per version
configurations = []
for version in versions:
configurations.append(generate_configuration(version))
# create the json file
c_cpp_properties = {
"configurations": configurations,
"version": 4
}
# write the c_cpp_properties.json file
with open(target_path, 'w') as f:
json.dump(c_cpp_properties, f, indent=4)
def generate_configuration(version):
"""Returns a configuration for the given postgres version.
>>> generate_configuration('14.8')
{
"name": "Citus Development Configuration - Postgres 14.8",
"includePath": [
"/usr/local/include",
"/home/citus/.pgenv/src/postgresql-14.8/src/**",
"${workspaceFolder}/**",
"${workspaceFolder}/src/include/",
],
"configurationProvider": "ms-vscode.makefile-tools"
}
"""
return {
"name": f"Citus Development Configuration - Postgres {version}",
"includePath": [
"/usr/local/include",
f"/home/citus/.pgenv/src/postgresql-{version}/src/**",
"${workspaceFolder}/**",
"${workspaceFolder}/src/include/",
],
"configurationProvider": "ms-vscode.makefile-tools"
}
if __name__ == '__main__':
arguments = docopt(__doc__, version='0.1.0')
main(arguments)

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{
"version": "0.2.0",
"configurations": [
{
"name": "Attach Citus (devcontainer)",
"type": "cppdbg",
"request": "attach",
"processId": "${command:pickProcess}",
"program": "/home/citus/.pgenv/pgsql/bin/postgres",
"additionalSOLibSearchPath": "/home/citus/.pgenv/pgsql/lib",
"setupCommands": [
{
"text": "handle SIGUSR1 noprint nostop pass",
"description": "let gdb not stop when SIGUSR1 is sent to process",
"ignoreFailures": true
}
],
},
]
}

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FROM ubuntu:22.04 AS base
# environment is to make python pass an interactive shell, probably not the best timezone given a wide variety of colleagues
ENV TZ=UTC
RUN ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone
# install build tools
RUN apt update && apt install -y \
bzip2 \
cpanminus \
curl \
flex \
gcc \
git \
libcurl4-gnutls-dev \
libicu-dev \
libkrb5-dev \
liblz4-dev \
libpam0g-dev \
libreadline-dev \
libselinux1-dev \
libssl-dev \
libxslt-dev \
libzstd-dev \
locales \
make \
perl \
pkg-config \
python3 \
python3-pip \
software-properties-common \
sudo \
uuid-dev \
valgrind \
zlib1g-dev \
&& add-apt-repository ppa:deadsnakes/ppa -y \
&& apt install -y \
python3.9-full \
&& apt clean
RUN sudo pip3 install pipenv pipenv-shebang
RUN cpanm install IPC::Run
RUN locale-gen en_US.UTF-8
# add the citus user to sudoers and allow all sudoers to login without a password prompt
RUN useradd -ms /bin/bash citus \
&& usermod -aG sudo citus \
&& echo '%sudo ALL=(ALL) NOPASSWD:ALL' >> /etc/sudoers
WORKDIR /home/citus
USER citus
# run all make commands with the number of cores available
RUN echo "export MAKEFLAGS=\"-j \$(nproc)\"" >> "/home/citus/.bashrc"
RUN git clone --branch v1.3.2 --depth 1 https://github.com/theory/pgenv.git .pgenv
COPY --chown=citus:citus pgenv/config/ .pgenv/config/
ENV PATH="/home/citus/.pgenv/bin:${PATH}"
ENV PATH="/home/citus/.pgenv/pgsql/bin:${PATH}"
USER citus
# build postgres versions separately for effective parrallelism and caching of already built versions when changing only certain versions
FROM base AS pg14
RUN MAKEFLAGS="-j $(nproc)" pgenv build 14.9
RUN rm .pgenv/src/*.tar*
RUN make -C .pgenv/src/postgresql-*/ clean
RUN make -C .pgenv/src/postgresql-*/src/include install
# create a staging directory with all files we want to copy from our pgenv build
# we will copy the contents of the staged folder into the final image at once
RUN mkdir .pgenv-staging/
RUN cp -r .pgenv/src .pgenv/pgsql-* .pgenv/config .pgenv-staging/
RUN rm .pgenv-staging/config/default.conf
FROM base AS pg15
RUN MAKEFLAGS="-j $(nproc)" pgenv build 15.4
RUN rm .pgenv/src/*.tar*
RUN make -C .pgenv/src/postgresql-*/ clean
RUN make -C .pgenv/src/postgresql-*/src/include install
# create a staging directory with all files we want to copy from our pgenv build
# we will copy the contents of the staged folder into the final image at once
RUN mkdir .pgenv-staging/
RUN cp -r .pgenv/src .pgenv/pgsql-* .pgenv/config .pgenv-staging/
RUN rm .pgenv-staging/config/default.conf
FROM base AS pg16
RUN MAKEFLAGS="-j $(nproc)" pgenv build 16.0
RUN rm .pgenv/src/*.tar*
RUN make -C .pgenv/src/postgresql-*/ clean
RUN make -C .pgenv/src/postgresql-*/src/include install
# create a staging directory with all files we want to copy from our pgenv build
# we will copy the contents of the staged folder into the final image at once
RUN mkdir .pgenv-staging/
RUN cp -r .pgenv/src .pgenv/pgsql-* .pgenv/config .pgenv-staging/
RUN rm .pgenv-staging/config/default.conf
FROM base AS uncrustify-builder
RUN sudo apt update && sudo apt install -y cmake tree
WORKDIR /uncrustify
RUN curl -L https://github.com/uncrustify/uncrustify/archive/uncrustify-0.68.1.tar.gz | tar xz
WORKDIR /uncrustify/uncrustify-uncrustify-0.68.1/
RUN mkdir build
WORKDIR /uncrustify/uncrustify-uncrustify-0.68.1/build/
RUN cmake ..
RUN make -sj8
RUN make install DESTDIR=/uncrustify
# builder for all pipenv's to get them contained in a single layer
FROM base AS pipenv
WORKDIR /workspaces/citus/
# tools to sync pgenv with vscode
COPY --chown=citus:citus .vscode/Pipfile .vscode/Pipfile.lock .devcontainer/.vscode/
RUN ( cd .devcontainer/.vscode && pipenv install )
# environment to run our failure tests
COPY --chown=citus:citus src/ src/
RUN ( cd src/test/regress && pipenv install )
# assemble the final container by copying over the artifacts from separately build containers
FROM base AS devcontainer
LABEL org.opencontainers.image.source=https://github.com/citusdata/citus
LABEL org.opencontainers.image.description="Development container for the Citus project"
LABEL org.opencontainers.image.licenses=AGPL-3.0-only
RUN yes | sudo unminimize
# install developer productivity tools
RUN sudo apt update \
&& sudo apt install -y \
autoconf2.69 \
bash-completion \
fswatch \
gdb \
htop \
libdbd-pg-perl \
libdbi-perl \
lsof \
man \
net-tools \
pspg \
tree \
vim \
&& sudo apt clean
# Since gdb will run in the context of the root user when debugging citus we will need to both
# download the gdbpg.py script as the root user, into their home directory, as well as add .gdbinit
# as a file owned by root
# This will make that as soon as the debugger attaches to a postgres backend (or frankly any other process)
# the gdbpg.py script will be sourced and the developer can direcly use it.
RUN sudo curl -o /root/gdbpg.py https://raw.githubusercontent.com/tvesely/gdbpg/6065eee7872457785f830925eac665aa535caf62/gdbpg.py
COPY --chown=root:root .gdbinit /root/
# add some common tools to the final container
# bin directory for user tools
RUN mkdir .bin
ENV PATH="/home/citus/.bin:${PATH}"
# for persistent bash history across devcontainers we need to have
# a) a directory to store the history in
# b) a prompt command to append the history to the file
# c) specify the history file to store the history in
# b and c are done in the .bashrc to make it persistent across shells only
RUN sudo install -d -o citus -g citus /commandhistory \
&& echo "export PROMPT_COMMAND='history -a' && export HISTFILE=/commandhistory/.bash_history" >> "/home/citus/.bashrc"
# install citus-dev
RUN git clone --branch develop https://github.com/citusdata/tools.git citus-tools \
&& ( cd citus-tools/citus_dev && pipenv install ) \
&& ln -s /home/citus/citus-tools/citus_dev/citus_dev-pipenv .bin/citus_dev \
&& sudo make -C citus-tools/uncrustify install bindir=/usr/local/bin pkgsysconfdir=/usr/local/etc/ \
&& mkdir -p ~/.local/share/bash-completion/completions/ \
&& ln -s ~/citus-tools/citus_dev/bash_completion ~/.local/share/bash-completion/completions/citus_dev
# TODO some LC_ALL errors, possibly solved by locale-gen
RUN git clone https://github.com/so-fancy/diff-so-fancy.git \
&& ln -s /home/citus/diff-so-fancy/diff-so-fancy .bin/
COPY --link --from=uncrustify-builder /uncrustify/usr/ /usr/
COPY --link --from=pg14 /home/citus/.pgenv-staging/ /home/citus/.pgenv/
COPY --link --from=pg15 /home/citus/.pgenv-staging/ /home/citus/.pgenv/
COPY --link --from=pg16 /home/citus/.pgenv-staging/ /home/citus/.pgenv/
COPY --link --from=pipenv /home/citus/.local/share/virtualenvs/ /home/citus/.local/share/virtualenvs/
# place to run your cluster with citus_dev
VOLUME /data
RUN sudo mkdir /data \
&& sudo chown citus:citus /data
COPY --chown=citus:citus .psqlrc .
# with the copy linking of layers github actions seem to misbehave with the ownership of the
# directories leading upto the link, hence a small patch layer to have to right ownerships set
RUN sudo chown --from=root:root citus:citus -R ~
# sets default pg version
RUN pgenv switch 16.0
# make connecting to the coordinator easy
ENV PGPORT=9700

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init: ../.vscode/c_cpp_properties.json ../.vscode/launch.json
../.vscode:
mkdir -p ../.vscode
../.vscode/launch.json: ../.vscode .vscode/launch.json
cp .vscode/launch.json ../.vscode/launch.json
../.vscode/c_cpp_properties.json: ../.vscode
./.vscode/generate_c_cpp_properties-json.py ../.vscode/c_cpp_properties.json

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.devcontainer/devcontainer.json Normal file
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{
"image": "ghcr.io/citusdata/citus-devcontainer:main",
"runArgs": [
"--cap-add=SYS_PTRACE",
],
"forwardPorts": [9700],
"customizations": {
"vscode": {
"extensions": [
"eamodio.gitlens",
"GitHub.copilot-chat",
"GitHub.copilot",
"github.vscode-github-actions",
"github.vscode-pull-request-github",
"ms-vscode.cpptools-extension-pack",
"ms-vsliveshare.vsliveshare",
],
"settings": {
"files.exclude": {
"**/*.o": true,
"**/.deps/": true,
}
},
}
},
"mounts": [
"type=volume,target=/data",
"source=citus-bashhistory,target=/commandhistory,type=volume",
],
"updateContentCommand": "./configure",
"postCreateCommand": "make -C .devcontainer/",
}

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PGENV_MAKE_OPTIONS=(-s)
PGENV_CONFIGURE_OPTIONS=(
--enable-debug
--enable-depend
--enable-cassert
--enable-tap-tests
'CFLAGS=-ggdb -Og -g3 -fno-omit-frame-pointer -DUSE_VALGRIND'
--with-openssl
--with-libxml
--with-libxslt
--with-uuid=e2fs
--with-icu
--with-lz4
)

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[[source]]
name = "pypi"
url = "https://pypi.python.org/simple"
verify_ssl = true
[packages]
mitmproxy = {editable = true, ref = "main", git = "https://github.com/citusdata/mitmproxy.git"}
construct = "==2.9.45"
docopt = "==0.6.2"
cryptography = ">=41.0.4"
pytest = "*"
psycopg = "*"
filelock = "*"
pytest-asyncio = "*"
pytest-timeout = "*"
pytest-xdist = "*"
pytest-repeat = "*"
pyyaml = "*"
[dev-packages]
black = "*"
isort = "*"
flake8 = "*"
flake8-bugbear = "*"
[requires]
python_version = "3.9"

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{
"_meta": {
"hash": {
"sha256": "b92bf682aeeea1a66a16beaf78584a5318fd0ae908ce85c7e2a4807aa2bee532"
},
"pipfile-spec": 6,
"requires": {
"python_version": "3.9"
},
"sources": [
{
"name": "pypi",
"url": "https://pypi.python.org/simple",
"verify_ssl": true
}
]
},
"default": {
"asgiref": {
"hashes": [
"sha256:4ef1ab46b484e3c706329cedeff284a5d40824200638503f5768edb6de7d58e9",
"sha256:ffc141aa908e6f175673e7b1b3b7af4fdb0ecb738fc5c8b88f69f055c2415214"
],
"markers": "python_version >= '3.6'",
"version": "==3.4.1"
},
"blinker": {
"hashes": [
"sha256:471aee25f3992bd325afa3772f1063dbdbbca947a041b8b89466dc00d606f8b6"
],
"version": "==1.4"
},
"brotli": {
"hashes": [
"sha256:02177603aaca36e1fd21b091cb742bb3b305a569e2402f1ca38af471777fb019",
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"isort": {
"hashes": [
"sha256:8bef7dde241278824a6d83f44a544709b065191b95b6e50894bdc722fcba0504",
"sha256:f84c2818376e66cf843d497486ea8fed8700b340f308f076c6fb1229dff318b6"
],
"index": "pypi",
"markers": "python_full_version >= '3.8.0'",
"version": "==5.12.0"
},
"mccabe": {
"hashes": [
"sha256:348e0240c33b60bbdf4e523192ef919f28cb2c3d7d5c7794f74009290f236325",
"sha256:6c2d30ab6be0e4a46919781807b4f0d834ebdd6c6e3dca0bda5a15f863427b6e"
],
"markers": "python_version >= '3.6'",
"version": "==0.7.0"
},
"mypy-extensions": {
"hashes": [
"sha256:4392f6c0eb8a5668a69e23d168ffa70f0be9ccfd32b5cc2d26a34ae5b844552d",
"sha256:75dbf8955dc00442a438fc4d0666508a9a97b6bd41aa2f0ffe9d2f2725af0782"
],
"markers": "python_version >= '3.5'",
"version": "==1.0.0"
},
"packaging": {
"hashes": [
"sha256:994793af429502c4ea2ebf6bf664629d07c1a9fe974af92966e4b8d2df7edc61",
"sha256:a392980d2b6cffa644431898be54b0045151319d1e7ec34f0cfed48767dd334f"
],
"markers": "python_version >= '3.7'",
"version": "==23.1"
},
"pathspec": {
"hashes": [
"sha256:1d6ed233af05e679efb96b1851550ea95bbb64b7c490b0f5aa52996c11e92a20",
"sha256:e0d8d0ac2f12da61956eb2306b69f9469b42f4deb0f3cb6ed47b9cce9996ced3"
],
"markers": "python_version >= '3.7'",
"version": "==0.11.2"
},
"platformdirs": {
"hashes": [
"sha256:b45696dab2d7cc691a3226759c0d3b00c47c8b6e293d96f6436f733303f77f6d",
"sha256:d7c24979f292f916dc9cbf8648319032f551ea8c49a4c9bf2fb556a02070ec1d"
],
"markers": "python_version >= '3.7'",
"version": "==3.10.0"
},
"pycodestyle": {
"hashes": [
"sha256:259bcc17857d8a8b3b4a2327324b79e5f020a13c16074670f9c8c8f872ea76d0",
"sha256:5d1013ba8dc7895b548be5afb05740ca82454fd899971563d2ef625d090326f8"
],
"markers": "python_version >= '3.8'",
"version": "==2.11.0"
},
"pyflakes": {
"hashes": [
"sha256:4132f6d49cb4dae6819e5379898f2b8cce3c5f23994194c24b77d5da2e36f774",
"sha256:a0aae034c444db0071aa077972ba4768d40c830d9539fd45bf4cd3f8f6992efc"
],
"markers": "python_version >= '3.8'",
"version": "==3.1.0"
},
"tomli": {
"hashes": [
"sha256:939de3e7a6161af0c887ef91b7d41a53e7c5a1ca976325f429cb46ea9bc30ecc",
"sha256:de526c12914f0c550d15924c62d72abc48d6fe7364aa87328337a31007fe8a4f"
],
"markers": "python_version < '3.11'",
"version": "==2.0.1"
},
"typing-extensions": {
"hashes": [
"sha256:8f92fc8806f9a6b641eaa5318da32b44d401efaac0f6678c9bc448ba3605faa0",
"sha256:df8e4339e9cb77357558cbdbceca33c303714cf861d1eef15e1070055ae8b7ef"
],
"markers": "python_version >= '3.8'",
"version": "==4.8.0"
}
}
}

49
.github/workflows/devcontainer.yml vendored Normal file
View File

@ -0,0 +1,49 @@
name: "Build devcontainer"
# Since building of containers can be quite time consuming, and take up some storage,
# there is no need to finish a build for a tag if new changes are concurrently being made.
# This cancels any previous builds for the same tag, and only the latest one will be kept.
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
on:
push:
paths:
- ".devcontainer/**"
workflow_dispatch:
jobs:
docker:
runs-on: ubuntu-latest
steps:
-
name: Docker meta
id: meta
uses: docker/metadata-action@v4
with:
images: |
ghcr.io/citusdata/citus-devcontainer
tags: |
type=ref,event=branch
type=sha
-
name: Set up Docker Buildx
uses: docker/setup-buildx-action@v2
-
name: 'Login to GitHub Container Registry'
uses: docker/login-action@v1
with:
registry: ghcr.io
username: ${{github.actor}}
password: ${{secrets.GITHUB_TOKEN}}
-
name: Build and push
uses: docker/build-push-action@v4
with:
context: "{{defaultContext}}:.devcontainer"
push: true
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=gha
cache-to: type=gha,mode=max

24
CONTRIBUTING.md
View File

@ -11,6 +11,30 @@ sign a Contributor License Agreement (CLA). For an explanation of
why we ask this as well as instructions for how to proceed, see the
[Microsoft CLA](https://cla.opensource.microsoft.com/).
### Devcontainer / Github Codespaces
The easiest way to start contributing is via our devcontainer. This container works both locally in visual studio code with docker-desktop/docker-for-mac as well as [Github Codespaces](https://github.com/features/codespaces). To open the project in vscode you will need the [Dev Containers extension](https://marketplace.visualstudio.com/items?itemName=ms-vscode-remote.remote-containers). For codespaces you will need to [create a new codespace](https://codespace.new/citusdata/citus).
With the extension installed you can run the following from the command pallet to get started
```
> Dev Containers: Clone Repository in Container Volume...
```
In the subsequent popup paste the url to the repo and hit enter.
```
https://github.com/citusdata/citus
```
This will create an isolated Workspace in vscode, complete with all tools required to build, test and run the Citus extension. We keep this container up to date with the supported postgres versions as well as the exact versions of tooling we use.
To quickly start we suggest splitting your terminal once to have two shells. The left one in the `/workspaces/citus`, the second one changed to `/data`. The left terminal will be used to interact with the project, the right one with a testing cluster.
To get citus installed from source we run `make install -s` in the first terminal. Once installed you can start a Citus cluster in the second terminal via `citus_dev make citus`. The cluster will run in the background, and can be interacted with via `citus_dev`. To get an overview of the available commands.
With the Citus cluster running you can connect to the coordinator in the first terminal via `psql -p9700`. Because the coordinator is the most common entrypoint the `PGPORT` environment is set accordingly, so a simple `psql` will connect directly to the coordinator.
### Getting and building
[PostgreSQL documentation](https://www.postgresql.org/support/versioning/) has a