The new shard copy code that was created for shard splits has some
advantages over the old shard copy code. The old code was using
worker_append_table_to_shard, which wrote to disk twice. And it also
didn't use binary copy when that was possible. Both of these issues
were fixed in the new copy code. This PR starts using this new copy
logic also for shard moves, not just for shard splits.
On my local machine I created a single shard table like this.
```sql
set citus.shard_count = 1;
create table t(id bigint, a bigint);
select create_distributed_table('t', 'id');
INSERT into t(id, a) SELECT i, i from generate_series(1, 100000000) i;
```
I then turned `fsync` off to make sure I wasn't bottlenecked by disk.
Finally I moved this shard between nodes with `citus_move_shard_placement`
with `block_writes`.
Before this PR a move took ~127s, after this PR it took only ~38s. So for this
small test this resulted in spending ~70% less time.
And I also tried the same test for a table that contained large strings:
```sql
set citus.shard_count = 1;
create table t(id bigint, a bigint, content text);
select create_distributed_table('t', 'id');
INSERT into t(id, a, content) SELECT i, i, 'aunethautnehoautnheaotnuhetnohueoutnehotnuhetncouhaeohuaeochgrhgd.athbetndairgexdbuhaobulrhdbaetoausnetohuracehousncaoehuesousnaceohuenacouhancoexdaseohusnaetobuetnoduhasneouhaceohusnaoetcuhmsnaetohuacoeuhebtokteaoshetouhsanetouhaoug.lcuahesonuthaseauhcoerhuaoecuh.lg;rcydabsnetabuesabhenth' from generate_series(1, 20000000) i;
```
It turns out that create_distributed_table
and citus_move/copy_shard_placement does not
work well concurrently.
To fix that, we need to acquire a lock, which
sounds like a good use of colocation lock.
However, the current usage of colocation lock is
limited to higher level UDFs like rebalance_table_shards
etc. Those usage of lock is still useful, but
we cannot acquire the same lock on citus_move_shard_placement
etc. because the coordinator connects to itself to acquire
the lock. Hence, the high level UDF blocks itself.
To fix that, we use one more colocation lock, with the placements
are the main objects to consider.
DESCRIPTION:
This PR extends support for Partitioned and Columnar tables in blocking 'citus_split_shard_by_split_points' workflow.
Columnar Support : No special handling required. Just removing checks that fails split for columnar table and adding test coverage.
Partitioned Table Support :
Skip copying of parent table as they are empty, The partitions contain data and are treated as co-located shards that will be copied separately.
Attach partitions to parent on destination after inserting new shard metadata and before creating foreign key constraints.
MISC:
Fix Bug #4949 where Blocking shard moves fails if there is a foreign key between partitioned distributed tables (from child to parent).
TEST:
Added new test 'citus_split_shards_columnar_partitioned' for splitting 'partitioned' and 'columnar + partitioned' table.
Added new test 'shard_move_constraints_blocking' to add coverage for shard move bug fix.
Updated test 'citus_split_shard_by_split_points_negative' to allow columnar and partitioned table.
* Remove if conditions with PG_VERSION_NUM < 13
* Remove server_above_twelve(&eleven) checks from tests
* Fix tests
* Remove pg12 and pg11 alternative test output files
* Remove pg12 specific normalization rules
* Some more if conditions in the code
* Change RemoteCollationIdExpression and some pg12/pg13 comments
* Remove some more normalization rules
* Blocking split setup
* Add missing type
* Missing API from Metadata Sync
* Shard Split e2e code
* Worker Split Copy DestReceiver skeleton
* Basic destreceiver code
* worker_split_copy UDF
* UDF calling
* Split points are text
* Isolate Tenant and Split Shard Unification
* Fixing executor and misc
* Reindent code
* Fixing UDF definitions
* Hello World Local Copy works
* Remote copy hello world works
* Local and Remote binary test
* Fixing text local copy and adding tests
* Hello World shard split works
* Negative tests
* Blocking Split workflow works
* Refactor
* Bug fix
* Reindent
* Cleaning up and adding comments
* Basic test for shard split workflow
* ReIndent
* Circle CI integration
* Removing include causing circle-ci build failure
* Remove SplitCopyDestReceiver and use PartitionedResultDestReceiver
* Add support for citus.enable_binary_protocol
* Reindent
* Fix build break
* Update Test
* Cleanup on catch
* Addressing open comments
* Update downgrade script and quote schema/table in COPY statement
* Fix metadata sync issue. Update regression test
* Isolation test and bug fix
* Add Isolation test, fix foreign constraint deadlock issue
* Misc code review comments
* Test name needing to be quoted
* Refactor code from review comments
* Explaining shardGroupSplitIntervalListList
* Fix upgrade & downgrade
* Fix broken test
* Test fix Round 2
* Fixing bug and modifying test appropriately
* Fully qualify copy udf name. Run Reindent
* Address PR comments
* Fix null handling when creating AuxiliaryStructures
* Ensure local copy is triggered in tests
* Limit max shards that can be created with split
* Test failure fix
* Remove split_mode and use shard_transfer_mode instead'
* Fix test failure
* Fix test failure
* Fixing permission issue when splitting non-superuser owned tables
* Fix test expected output
* Remove extra space
* Fix test
* attempt to fix test
* Addressing Marco's PR comment
* Only clean shards created by workflow
* Remove from merge
* Update test
This PR makes all of the features open source that were previously only
available in Citus Enterprise.
Features that this adds:
1. Non blocking shard moves/shard rebalancer
(`citus.logical_replication_timeout`)
2. Propagation of CREATE/DROP/ALTER ROLE statements
3. Propagation of GRANT statements
4. Propagation of CLUSTER statements
5. Propagation of ALTER DATABASE ... OWNER TO ...
6. Optimization for COPY when loading JSON to avoid double parsing of
the JSON object (`citus.skip_jsonb_validation_in_copy`)
7. Support for row level security
8. Support for `pg_dist_authinfo`, which allows storing different
authentication options for different users, e.g. you can store
passwords or certificates here.
9. Support for `pg_dist_poolinfo`, which allows using connection poolers
in between coordinator and workers
10. Tracking distributed query execution times using
citus_stat_statements (`citus.stat_statements_max`,
`citus.stat_statements_purge_interval`,
`citus.stat_statements_track`). This is disabled by default.
11. Blocking tenant_isolation
12. Support for `sslkey` and `sslcert` in `citus.node_conninfo`
Columnar: support relation options with ALTER TABLE.
Use ALTER TABLE ... SET/RESET to specify relation options rather than
alter_columnar_table_set() and alter_columnar_table_reset().
Not only is this more ergonomic, but it also allows better integration
because it can be treated like DDL on a regular table. For instance,
citus can use its own ProcessUtility_hook to distribute the new
settings to the shards.
DESCRIPTION: Columnar: support relation options with ALTER TABLE.
First worker node has a special meaning for modifications on the replicated tables
It is used to acquire a remote lock, such that the modifications are serialized.
With this commit, we make sure that we do not let any distributed query to see a
different 'first worker node' while first worker node is disabled.
Note that, maybe implicitly mentioned above, when first worker node is disabled,
the first worker node changes, that's why we have to handle the situation.
* Separate build of citus.so and citus_columnar.so.
Because columnar code is statically-linked to both modules, it doesn't
make sense to load them both at once.
A subsequent commit will make the modules entirely separate and allow
loading them both simultaneously.
Author: Yanwen Jin
* Separate citus and citus_columnar modules.
Now the modules are independent. Columnar can be loaded by itself, or
along with citus.
Co-authored-by: Jeff Davis <jefdavi@microsoft.com>
The issue in question is caused when rebalance / replication call `FullShardPlacementList` which returns all shard placements (including those in disabled nodes with `citus_disable_node`). Eventually, `FindFillStateForPlacement` looks for the state across active workers and fails to find a state for the placements which are in the disabled workers causing a seg fault shortly after.
Approach:
* `ActivePlacementHash` was not using the status of the shard placement's node to determine if the node it is active. Initially, I just fixed that.
* Additionally, I refactored the code which handles active shards in replication / rebalance to:
* use a single function to determine if a shard placement is active.
* do the shard active shard filtering before calling `RebalancePlacementUpdates` and `ReplicationPlacementUpdates`, so test methods like `shard_placement_rebalance_array` and `shard_placement_replication_array` which have different shard placement active requirements can do their own filtering while using the same rebalance / replicate logic that `rebalance_table_shards` and `replicate_table_shards` use.
Fix#5664
With this commit, rebalancer backends are identified by application_name = citus_rebalancer
and the regular internal backends are identified by application_name = citus_internal
With this commit we've started to propagate sequences and shell
tables within the object dependency resolution. So, ensuring any
dependencies for any object will consider shell tables and sequences
as well. Separate logics for both shell tables and sequences have
been removed.
Since both shell tables and sequences logic were implemented as a
part of the metadata handling before that logic, we were propagating
them while syncing table metadata. With this commit we've divided
metadata (which means anything except shards thereafter) syncing
logic into multiple parts and implemented it either as a part of
ActivateNode. You can check the functions called in ActivateNode
to check definition of different metadata.
Definitions of start_metadata_sync_to_node and citus_activate_node
have also been updated. citus_activate_node will basically create
an active node with all metadata and reference table shards.
start_metadata_sync_to_node will be same with citus_activate_node
except replicating reference tables. stop_metadata_sync_to_node
will remove all the metadata. All of those UDFs need to be called
by superuser.
Split distributed/version_compat.h into dependency-free
pg_version_compat.h, and the original which still has
dependencies. The original doesn't have much purpose, but until other
files have better discipline about including the correct header files,
then it's still needed.
Also make distributed/listutils.h dependency-free. Should be moved
outside of 'distributed' subdirectory, but that will cause significant
code churn, so leave for another cleanup patch.
Now both files can be included in columnar without creating a
dependency on citus.
This UDF coordinates connectivity checks accross the whole cluster.
This UDF gets the list of active readable nodes in the cluster, and
coordinates all connectivity checks in sequential order.
The algorithm is:
for sourceNode in activeReadableWorkerList:
c = connectToNode(sourceNode)
for targetNode in activeReadableWorkerList:
result = c.execute(
"SELECT citus_check_connection_to_node(targetNode.name,
targetNode.port")
emit sourceNode.name,
sourceNode.port,
targetNode.name,
targetNode.port,
result
- result -> true -> connection attempt from source to target succeeded
- result -> false -> connection attempt from source to target failed
- result -> NULL -> connection attempt from the current node to source node failed
I suggest you use the following query to get an overview on the connectivity:
SELECT bool_and(COALESCE(result, false))
FROM citus_check_cluster_node_health();
Whenever this query returns false, there is a connectivity issue, check in detail.
PostgreSQL does not need calling this function since 7.4 release, and it
is a NOOP.
For more details, check PostgreSQL commit below :
commit dd04e958c8b03c0f0512497651678c7816af3198
Author: Tom Lane <tgl@sss.pgh.pa.us>
Date: Sun Mar 9 03:34:10 2003 +0000
tuplestore_donestoring() isn't needed anymore, but provide a no-op
macro definition so as not to create compatibility problems.
diff --git a/src/include/utils/tuplestore.h b/src/include/utils/tuplestore.h
index b46babacd1..76fe9fb428 100644
--- a/src/include/utils/tuplestore.h
+++ b/src/include/utils/tuplestore.h
@@ -17,7 +17,7 @@
* Portions Copyright (c) 1996-2002, PostgreSQL Global Development Group
* Portions Copyright (c) 1994, Regents of the University of California
*
- * $Id: tuplestore.h,v 1.8 2003/03/09 02:19:13 tgl Exp $
+ * $Id: tuplestore.h,v 1.9 2003/03/09 03:34:10 tgl Exp $
*
*-------------------------------------------------------------------------
*/
@@ -41,6 +41,9 @@ extern Tuplestorestate *tuplestore_begin_heap(bool randomAccess,
extern void tuplestore_puttuple(Tuplestorestate *state, void *tuple);
+/* tuplestore_donestoring() used to be required, but is no longer used */
+#define tuplestore_donestoring(state) ((void) 0)
+
/* backwards scan is only allowed if randomAccess was specified 'true' */
extern void *tuplestore_gettuple(Tuplestorestate *state, bool forward,
bool *should_free);
citus_check_connection_to_node runs a simple query on a remote node and
reports whether this attempt was successful.
This UDF will be used to make sure each worker node can connect to all
the worker nodes in the cluster.
parameters:
nodename: required
nodeport: optional (default: 5432)
return value:
boolean success
In the past, we allowed users to manually switch to 1PC
(e.g., one phase commit). However, with this commit, we
don't. All multi-shard modifications are done via 2PC.
The logging of the amount of ignored moves crashed when no distributed
tables existed in a cluster. This also fixes in passing that the logging
of ignored moves logs the correct number of ignored moves if there
exist multiple colocation groups and all are rebalanced at the same time.
As we use the current user to sync the metadata to the nodes
with #5105 (and many other PRs), there is no reason that
prevents us to use the coordinated transaction for metadata syncing.
This commit also renames few functions to reflect their actual
implementation.
Jelte Fennema
Naisila Puka
Onder Kalaci
Nitish Upreti
aykutbozkurt
jeff-davis
Marco Slot
jeff-davis
Gledis Zeneli
Halil Ozan Akgul
Teja Mupparti
Burak Velioglu
Hanefi Onaldi
Ahmet Gedemenli
Philip Dubé
Önder Kalacı
Sait Talha Nisanci
Onur Tirtir