Since PG13 changed the list, a listcell doesn't contain data anymore.
Therefore Set_ptr_value macro is created, so that depending on the
version it will either use cell->data.ptr_value or cell->ptr_value.
Commit on Postgres side:
1cff1b95ab6ddae32faa3efe0d95a820dbfdc164
Since ExplainOnePlan expects BufferUsage as well with PG >= 13,
ExplainOnePlanCompat is added.
Commit on Postgres side:
ed7a5095716ee498ecc406e1b8d5ab92c7662d10
Commit on postgres side:
05d8449e73694585b59f8b03aaa087f04cc4679a
Command on postgres side:
git log --all --grep="hashutils"
include common/hashfn.h for pg >= 13
tag_hash was moved from hsearch.h to hashutils.h then to hashfn.h
Commits on Postgres side:
9341c783cc42ffae5860c86bdc713bd47d734ffd
PortalDefineQuery doesn't accept char* for command tag anymore with PG
>= 13. We are currently only using it with Select, therefore a Portal
define query compat for select is created.
Commit on PG side:
2f9661311b83dc481fc19f6e3bda015392010a40
As the new planner and pg_plan_query_compat methods expect the query
string as well, macros are defined to be compatible in different
versions of postgres.
Relevant commit on Postgres:
6aba63ef3e606db71beb596210dd95fa73c44ce2
Command on Postgres:
git log --all --grep="pg_plan_query"
With PG13 heap_* (heap_open, heap_close etc) are replaced with table_*
(table_open, table_close etc).
It is better to use the new table access methods in the codebase and
define the macros for the previous versions as we can easily remove the
macro without having to change the codebase when we drop the support for
the old version.
Commits that introduced this change on Postgres:
f25968c49697db673f6cd2a07b3f7626779f1827
e0c4ec07284db817e1f8d9adfb3fffc952252db0
4b21acf522d751ba5b6679df391d5121b6c4a35f
Command to see relevant commits on Postgres side:
git log --all --grep="heap_open"
Pass the list to lnext API
lnext API now expects the list as well.
The commit on Postgres that introduced the change: 1cff1b95ab6ddae32faa3efe0d95a820dbfdc164
lnext_compat and list_delete_cell_compat macros are introduced so that
we can use these macros in the codebase without having to use #if
directives in the codebase.
Related commit on postgres:
1cff1b95ab6ddae32faa3efe0d95a820dbfdc164
Command to search in postgres:
git log --all --grep="list_delete_cell"
add ListCellAndListWrapper
When iterating a list in separate function calls, we need both the list
and the current cell starting from PG13, therefore
ListCellAndListWrapper is added to store both as a wrapper.
Use ListCellAndListWrapper in foreign key test udfs
As we iterate a list in these udfs using a functionContext, we need to
use the wrapper to be able to access both the list and the current cell.
With this patch, we introduce `locally_reserved_shared_connections.c/h` files
which are responsible for reserving some space in shared memory counters
upfront.
We sometimes need to reserve connections, but not necessarily
establish them. For example:
- COPY command should reserve connections as it cannot know which
connections it needs in which order. COPY establishes connections
as any input data hits the workers. For example, for router COPY
command, it only establishes 1 connection.
As discussed here (https://github.com/citusdata/citus/pull/3849#pullrequestreview-431792473),
COPY needs to reserve connections up-front, otherwise we can end
up with resource starvation/un-detected deadlocks.
* ensure propagation of CHECK statements to workers with parantheses & adjust regression test outputs
* add tests for distributing tables with simple CHECK constraints
* added test for CHECK on bool variable
Enable custom aggregates with multiple parameters to be executed on workers.
#2921 introduces distributed execution of custom aggregates. One of the limitations of this feature is that only aggregate functions with a single aggregation parameter can be pushed to worker nodes. Aim of this change is to remove that limitation and support handling of multi-parameter aggregates.
Resolves: #3997
See also: #2921
* Use CalculateUniformHashRangeIndex in HashPartitionId
INT32_MIN definition can change among different platforms hence it is
possible to get overflow, we would see crashes because of this in debian
distros. We have already solved a similar problem with introducing
CalculateUniformHashRangeIndex method, hence to solve it we can use the
same method, this also removes some duplication and has a single place
to decide that.
* Use PG_INT32_XX instead of INT32_XX to be safer
With adaptive connection management, we might have some connections
which are not fully initialized. Those connections should not be
qualified as available.
1) Rename CONNECTION_PER_PLACEMENT to REQUIRE_CLEAN_CONNECTION. This is
mostly to make things clear as the new name reveals more.
2) We also make sure that mark all the copy connections critical,
even if they are accessed earlier in the transction
The executor relies on WorkerPool, and many other places rely on WorkerNode.
With this commit, we make sure that they are sorted via the same function/logic.
Some GUCs support a list of values which is indicated by GUC_LIST_INPUT flag.
When an ALTER ROLE .. SET statement is executed, the new configuration
default for affected users and databases are stored in the
setconfig(text[]) column in a pg_db_role_setting record.
If a GUC that supports a list of values is used in an ALTER ROLE .. SET
statement, we need to split the text into items delimited by commas.
* use adaptive executor even if task-tracker is set
* Update check-multi-mx tests for adaptive executor
Basically repartition joins are enabled where necessary. For parallel
tests max adaptive executor pool size is decresed to 2, otherwise we
would get too many clients error.
* Update limit_intermediate_size test
It seems that when we use adaptive executor instead of task tracker, we
exceed the intermediate result size less in the test. Therefore updated
the tests accordingly.
* Update multi_router_planner
It seems that there is one problem with multi_router_planner when we use
adaptive executor, we should fix the following error:
+ERROR: relation "authors_range_840010" does not exist
+CONTEXT: while executing command on localhost:57637
* update repartition join tests for check-multi
* update isolation tests for repartitioning
* Error out if shard_replication_factor > 1 with repartitioning
As we are removing the task tracker, we cannot switch to it if
shard_replication_factor > 1. In that case, we simply error out.
* Remove MULTI_EXECUTOR_TASK_TRACKER
* Remove multi_task_tracker_executor
Some utility methods are moved to task_execution_utils.c.
* Remove task tracker protocol methods
* Remove task_tracker.c methods
* remove unused methods from multi_server_executor
* fix style
* remove task tracker specific tests from worker_schedule
* comment out task tracker udf calls in tests
We were using task tracker udfs to test permissions in
multi_multiuser.sql. We should find some other way to test them, then we
should remove the commented out task tracker calls.
* remove task tracker test from follower schedule
* remove task tracker tests from multi mx schedule
* Remove task-tracker specific functions from worker functions
* remove multi task tracker extra schedule
* Remove unused methods from multi physical planner
* remove task_executor_type related things in tests
* remove LoadTuplesIntoTupleStore
* Do initial cleanup for repartition leftovers
During startup, task tracker would call TrackerCleanupJobDirectories and
TrackerCleanupJobSchemas to clean up leftover directories and job
schemas. With adaptive executor, while doing repartitions it is possible
to leak these things as well. We don't retry cleanups, so it is possible
to have leftover in case of errors.
TrackerCleanupJobDirectories is renamed as
RepartitionCleanupJobDirectories since it is repartition specific now,
however TrackerCleanupJobSchemas cannot be used currently because it is
task tracker specific. The thing is that this function is a no-op
currently.
We should add cleaning up intermediate schemas to DoInitialCleanup
method when that problem is solved(We might want to solve it in this PR
as well)
* Revert "remove task tracker tests from multi mx schedule"
This reverts commit 03ecc0a681.
* update multi mx repartition parallel tests
* not error with task_tracker_conninfo_cache_invalidate
* not run 4 repartition queries in parallel
It seems that when we run 4 repartition queries in parallel we get too
many clients error on CI even though we don't get it locally. Our guess
is that, it is because we open/close many connections without doing some
work and postgres has some delay to close the connections. Hence even
though connections are removed from the pg_stat_activity, they might
still not be closed. If the above assumption is correct, it is unlikely
for it to happen in practice because:
- There is some network latency in clusters, so this leaves some times
for connections to be able to close
- Repartition joins return some data and that also leaves some time for
connections to be fully closed.
As we don't get this error in our local, we currently assume that it is
not a bug. Ideally this wouldn't happen when we get rid of the
task-tracker repartition methods because they don't do any pruning and
might be opening more connections than necessary.
If this still gives us "too many clients" error, we can try to increase
the max_connections in our test suite(which is 100 by default).
Also there are different places where this error is given in postgres,
but adding some backtrace it seems that we get this from
ProcessStartupPacket. The backtraces can be found in this link:
https://circleci.com/gh/citusdata/citus/138702
* Set distributePlan->relationIdList when it is needed
It seems that we were setting the distributedPlan->relationIdList after
JobExecutorType is called, which would choose task-tracker if
replication factor > 1 and there is a repartition query. However, it
uses relationIdList to decide if the query has a repartition query, and
since it was not set yet, it would always think it is not a repartition
query and would choose adaptive executor when it should choose
task-tracker.
* use adaptive executor even with shard_replication_factor > 1
It seems that we were already using adaptive executor when
replication_factor > 1. So this commit removes the check.
* remove multi_resowner.c and deprecate some settings
* remove TaskExecution related leftovers
* change deprecated API error message
* not recursively plan single relatition repartition subquery
* recursively plan single relation repartition subquery
* test depreceated task tracker functions
* fix overlapping shard intervals in range-distributed test
* fix error message for citus_metadata_container
* drop task-tracker deprecated functions
* put the implemantation back to worker_cleanup_job_schema_cachesince citus cloud uses it
* drop some functions, add downgrade script
Some deprecated functions are dropped.
Downgrade script is added.
Some gucs are deprecated.
A new guc for repartition joins bucket size is added.
* order by a test to fix flappiness
Here are the updated make targets:
- install: install everything except downgrade scripts.
- install-downgrades: build and install only the downgrade migration scripts.
- install-all: install everything along with the downgrade migration scripts.
The reason we should use ActiveReadableNodeList instead of ActiveReadableNonCoordinatorNodeList is that if coordinator is added to cluster as a worker, it should be counted as well. Otherwise if there is only coordinator in the cluster, the count will be 0, hence we get a warning.
In MultiTaskTrackerExecute, we should connect to coordinator if it is
added to the cluster because it will also be assigned tasks.
ActiveReadableWorkerNodeList doesn't include coordinator, however if
coordinator is added as a worker, we should also include that while
planning. The current methods are very easily misusable and this
requires a refactoring to make the distinction between methods that
include coordinator and that don't very explicit as they can introduce
subtle/major bugs pretty easily.
We were using ALL_WORKERS TargetWorkerSet while sending temporary schema
creation and cleanup. We(well mostly I) thought that ALL_WORKERS would also include coordinator when it is added as a worker. It turns out that it was FILTERING OUT the coordinator even if it is added as a worker to the cluster.
So to have some context here, in repartitions, for each jobId we create
(at least we were supposed to) a schema in each worker node in the cluster. Then we partition each shard table into some intermediate files, which is called the PARTITION step. So after this partition step each node has some intermediate files having tuples in those nodes. Then we fetch the partition files to necessary worker nodes, which is called the FETCH step. Then from the files we create intermediate tables in the temporarily created schemas, which is called a MERGE step. Then after evaluating the result, we remove the temporary schemas(one for each job ID in each node) and files.
If node 1 has file1, and node 2 has file2 after PARTITION step, it is
enough to either move file1 from node1 to node2 or vice versa. So we
prune one of them.
In the MERGE step, if the schema for a given jobID doesn't exist, the
node tries to use the `public` schema if it is a superuser, which is
actually added for testing in the past.
So when we were not sending schema creation comands for each job ID to
the coordinator(because we were using ALL_WORKERS flag, and it doesn't
include the coordinator), we would basically not have any schemas for
repartitions in the coordinator. The PARTITION step would be executed on
the coordinator (because the tasks are generated in the planner part)
and it wouldn't give us any error because it doesn't have anything to do
with the temporary schemas(that we didn't create). But later two things
would happen:
- If by chance the fetch is pruned on the coordinator side, we the other
nodes would fetch the partitioned files from the coordinator and execute
the query as expected, because it has all the information.
- If the fetch tasks are not pruned in the coordinator, in the MERGE
step, the coordinator would either error out saying that the necessary
schema doesn't exist, or it would try to create the temporary tables
under public schema ( if it is a superuser). But then if we had the same
task ID with different jobID it would fail saying that the table already
exists, which is an error we were getting.
In the first case, the query would work okay, but it would still not do
the cleanup, hence we would leave the partitioned files from the
PARTITION step there. Hence ensure_no_intermediate_data_leak would fail.
To make things more explicit and prevent such bugs in the future,
ALL_WORKERS is named as ALL_NON_COORD_WORKERS. And a new flag to return
all the active nodes is added as ALL_DATA_NODES. For repartition case,
we don't use the only-reference table nodes but this version makes the
code simpler and there shouldn't be any significant performance issue
with that.
DESCRIPTION: Force aliases in deparsing for queries with anonymous column references
Fixes: #3985
The root cause has todo with discrepancies in the query tree we create. I think in the future we should spend some time on categorising all changes we made to ruleutils and see if we can change the data structure `query` we pass to the deparser to have an actual valid postgres query for the deparser to render.
For now the fix is to keep track, besides changing the names of the entries in the target list, also if we have a reference to an anonymous columns. If there are anonymous columns we set the `printaliases` flag to true which forces the deparser to add the aliases.
Rename TargetWorkerSet enums to make them more explicit about what they
mean. Ideally it would be good to treat everything as a node without the
'worker' concept because it makes things complicated. Another
improvement could be to rename TargetWorkerSet as TargetNodeSet but it
goes to renaming many occurrences of Worker, which is probably too big
for this PR.
Static analysis found some issues where we used the result from
ExtractResultRelationRTE, without checking that it wasn't NULL. It seems
like in all these cases it can never actually be NULL, since we have checked
before that it isn't a SELECT query. So, this PR is mostly to make static
analysis happy (and protect a bit against future changes of the code).
Static analysis found an issue where we could dereference `NULL`, because
`CreateDummyPlacement` could return `NULL` when there were no workers. This
PR changes it so that it never returns `NULL`, which was intended by
@marcocitus when doing this change: https://github.com/citusdata/citus/pull/3887/files#r438136433
While adding tests for citus on a single node I also added some more basic
tests and it turns out we error out on repartition joins. This has been
present since `shouldhaveshards` was introduced and is not trivial to fix.
So I created a separate issue for this: https://github.com/citusdata/citus/issues/3996
We keep accumulating more and more scripts to flag issues in CI. This is
good, but we are currently missing consistent documentation for them.
This commit moves all these scripts to the `ci` directory and adds some
documentation for all of them in the README. It also makes sure that the
last line of output of a failed script points to this documentation.
#3866 removed the shard ID hash in metadata_cache.c to simplify cache management,
but we observed a significant performance regression that was being masked by the
performance improvement provided by #3654 in our benchmarks, but #3654 only
applies to specific workloads.
This PR brings back the shard ID cache as it existed before #3866 with some extra
measures to handle invalidation. When we load a table entry, we overwrite
ShardIdCacheEntry->tableEntry pointers for all the shards in that table, though
it's possible that the table no longer contains the old shard ID or the table
entry is never reloaded, which would leave a dangling pointer once the table
entry is freed. To handle that case, we remove all shard ID cache entries that
point exactly to that table entry when a table is freed (at the end of the
transaction or any call to CitusTableCacheFlushInvalidatedEntries).
Co-authored-by: SaitTalhaNisanci <s.talhanisanci@gmail.com>
Co-authored-by: Marco Slot <marco.slot@gmail.com>
Co-authored-by: Jelte Fennema <github-tech@jeltef.nl>
It was possible to get an assertion error, if a DML command was
cancelled that opened a connection and then "ROLLBACK TO SAVEPOINT" was
used to continue the transaction. The reason for this was that canceling
the transaction might leave the `claimedExclusively` flag on for (some
of) it's connections.
This caused an assertion failure because `CanUseExistingConnection`
would return false and a new connection would be opened, and then there
would be two connections doing DML for the same placement. Which is
disallowed. That this situation caused an assertion failure instead of
an error, means that without asserts this could possibly result in some
visibility bugs, similar to the ones described
https://github.com/citusdata/citus/issues/3867
This is so we don't need to calculate it twice in
insert_select_executor.c and multi_explain.c, which can
cause discrepancy if an update in one of them is not
reflected in the other site.
* Not set TaskExecution with adaptive executor
Adaptive executor is using a utility method from task tracker for
repartition joins, however adaptive executor doesn't need taskExecution.
It is only used by task tracker. This causes a problem when explain
analyze is used because what taskExecution is pointing to might be
random.
We solve this by not setting taskExecution from adaptive executor. So it
will stay NULL as set by CreateTask.
* use same memory context as task for taskExecution
Co-authored-by: Jelte Fennema <github-tech@jeltef.nl>
As suggested by @marcocitus in https://github.com/citusdata/citus/pull/3911#issuecomment-643978531, there was
a regression in #3893. If another backend would write a file during deletion of
the intermediate results directory, this file would not necessarily be deleted.
The approach used in `CitusRemoveDirectory` is to try recursive removal of the
directory again if it has failed. This does not work here, since when a file
can not be removed for other reasons (e.g. `EPERM`) it will not throw an error
anymore. So then we would get into an infinite removal loop. Instead I now
`rename` the directory before removing it. That way other backends will not
write files to it anymore.
We sort the workerList because adaptive connection management
(e.g., OPTIONAL_CONNECTION) requires any concurrent executions
to wait for the connections in the same order to prevent any
starvation. If we don't sort, we might end up with:
Execution 1: Get connection for worker 1, wait for worker 2
Execution 2: Get connection for worker 2, wait for worker 1
and, none could proceed. Instead, we enforce every execution establish
the required connections to workers in the same order.
In #3901 the "Data received from worker(s)" sections were added to EXPLAIN
ANALYZE. After merging @pykello posted some review comments. This addresses
those comments as well as fixing a other issues that I found while addressing
them. The things this does:
1. Fix `EXPLAIN ANALYZE EXECUTE p1` to not increase received data on every
execution
2. Fix `EXPLAIN ANALYZE EXECUTE p1(1)` to not return 0 bytes as received data
allways.
3. Move `EXPLAIN ANALYZE` specific logic to `multi_explain.c` from
`adaptive_executor.c`
4. Change naming of new explain sections to `Tuple data received from node(s)`.
Firstly because a task can reference the coordinator too, so "worker(s)" was
incorrect. Secondly to indicate that this is tuple data and not all network
traffic that was performed.
5. Rename `totalReceivedData` in our codebase to `totalReceivedTupleData` to
make it clearer that it's a tuple data counter, not all network traffic.
6. Actually add `binary_protocol` test to `multi_schedule` (woops)
7. Fix a randomly failing test in `local_shard_execution.sql`.
Shard id to index mapping stored in cache entry as there may now be multiple entries alive for a given relation
insert_select_executor: revert copying cache entry, which was a hack added to avoid memory safety issues
Sadly this does not actually work yet for binary protocol data, because
when doing EXPLAIN ANALYZE we send two commands at the same time. This
means we cannot use `SendRemoteCommandParams`, and thus cannot use the
binary protocol. This can still be useful though when using the text
protocol, to find out that a lot of data is being sent.
* Insert select with master query
* Use relid to set custom_scan_tlist varno
* Reviews
* Fixes null check
Co-authored-by: Marco Slot <marco.slot@gmail.com>
This can save a lot of data to be sent in some cases, thus improving
performance for which inter query bandwidth is the bottleneck.
There's some issues with enabling this as default, so that's currently not done.
DESCRIPTION: Adds support to partially push down tdigest aggregates
tdigest extensions: https://github.com/tvondra/tdigest
This PR implements the partial pushdown of tdigest calculations when possible. The extension adds a tdigest type which can be combined into the same structure. There are several aggregate functions that can be used to get;
- a quantile
- a list of quantiles
- the quantile of a hypothetical value
- a list of quantiles for a list of hypothetical values
These function can work both on values or tdigest types.
Since we can create tdigest values either by combining them, or based on a group of values we can rewrite the aggregates in such a way that most of the computation gets delegated to the compute on the shards. This both speeds up the percentile calculations because the values don't have to be sorted while at the same time making the transfer size from the shards to the coordinator significantly less.
We still recursively plan some cases, eg:
- INSERTs
- SELECT FOR UPDATE when reference tables in query
- Everything must be same single shard & replication model
We wrap worker tasks in worker_save_query_explain_analyze() so we can fetch
their explain output later by a call worker_last_saved_explain_analyze().
Fixes#3519Fixes#2347Fixes#2613Fixes#621
This code is not needed anymore since #3668 was merged.
It's actually causing some issues when using the binary Postgres
protocol, because postgres thinks it gets a `bigint` from
the worker, but actually gets an normal `int`.
The query in question that fails is this:
```sql
CREATE TABLE test_table_1(id int, val1 int);
CREATE TABLE test_table_2(id int, val1 bigint);
SELECT create_distributed_table('test_table_1', 'id');
SELECT create_distributed_table('test_table_2', 'id');
INSERT INTO test_table_1 VALUES(1,1),(2,2),(3,3);
INSERT INTO test_table_2 VALUES(1,1),(3,3),(4,5);
SELECT val1
FROM test_table_1 LEFT JOIN test_table_2 USING(id, val1)
ORDER BY 1;
```
The difference in queries that is sent to the workers after this change is this, for this query:
```diff
--- query_old.sql 2020-06-09 09:51:21.460000000 +0200
+++ query_new.sql 2020-06-09 09:51:39.500000000 +0200
@@ -1 +1 @@
-SELECT worker_column_1 AS val1 FROM (SELECT test_table_1.val1 AS worker_column_1 FROM (public.test_table_1_102015 test_table_1(id, val1) LEFT JOIN public.test_table_2_102019 test_table_2(id, val1) USING (id, val1))) worker_subquery
+SELECT worker_column_1 AS val1 FROM (SELECT val1 AS worker_column_1 FROM (public.test_table_1_102015 test_table_1(id, val1) LEFT JOIN public.test_table_2_102019 test_table_2(id, val1) USING (id, val1))) worker_subquery
```
This is a different version of #3634. It also removes SwallowErrors, but
instead of modifying our own functions to not throw errors, it uses the
postgres built in `PathNameDeleteTemporaryDir` function. This function
does not throw errors.
Since this change is for a bugfix, I tried to minimize the changes.
PRs with the following changes would be good to do separately from this
PR:
1. Use PathName(Create|Open|Delete)Temporary(File|Dir) to open and
remove all files/dirs instead of our own custom file functions.
2. Prefix our outmost files/directories with `PG_TEMP_FILE_PREFIX` so
that they are identified by Postgres as temporary files, which will be
removed at postmaster start. This way we do not have to do this cleanup
ourselves.
3. Store the files in the temporary table space if it exists.
Fixes#3634Fixes#3618
Sait Talha Nisanci
Onder Kalaci
nukoyluoglu
Benjamin Satzger
Halil Ozan Akgul
Hanefi Önaldı
Hadi Moshayedi
Marco Slot
Nils Dijk
Jelte Fennema
Onur Tirtir
Philip Dubé
citus bot
Marco Slot