While investigating replication slots leftovers
in PR https://github.com/citusdata/citus/pull/7338,
I ran into the following refactoring/cleanup
that can be done in our test suite:
- Add separate test to remove non default nodes
- Remove coordinator removal from `add_coordinator` test
Use `remove_coordinator_from_metadata` test where needed
- Don't print nodeids in `multi_multiuser_auth` and
`multi_poolinfo_usage`
tests
- Use `startswith` when checking for isolation or failure tests
- Add some dependencies accordingly in `run_test.py` for running flaky
test schedules
DESCRIPTION: Adds support from issuing role management commands from worker nodes
It's unlikely to get into a distributed deadlock with role commands, we
don't care much about them at the moment.
There were several attempts to reduce the chances of a deadlock but we
didn't any of them merged into main branch yet, see:
#7325#7016#7009
When I run this test in my local, the size of the table after the DELETE
command is around 58785792. Hence, I assume that the diffs suggest that
the Vacuum had no effect. The current solution is to run the VACUUM
command three times instead of once.
Example diff:
https://github.com/citusdata/citus/actions/runs/6722231142/attempts/1#summary-18269870674
```diff
insert into local_vacuum_table select i from generate_series(1,1000000) i;
delete from local_vacuum_table;
VACUUM local_vacuum_table;
SELECT CASE WHEN s BETWEEN 20000000 AND 25000000 THEN 22500000 ELSE s END
FROM pg_total_relation_size('local_vacuum_table') s ;
s
----------
- 22500000
+ 58785792
(1 row)
```
See more diff examples in the PR description
https://github.com/citusdata/citus/pull/7334
https://github.com/citusdata/citus/actions/runs/6745019678/attempts/1#summary-18336188930
```diff
insert into target_table SELECT a*2 FROM source_table RETURNING a;
-NOTICE: executing the command locally: SELECT bytes FROM fetch_intermediate_results(ARRAY['repartitioned_results_xxxxx_from_4213582_to_0','repartitioned_results_xxxxx_from_4213584_to_0']::text[],'localhost',57638) bytes
+NOTICE: executing the command locally: SELECT bytes FROM fetch_intermediate_results(ARRAY['repartitioned_results_3940758121873413_from_4213584_to_0','repartitioned_results_3940758121873413_from_4213582_to_0']::text[],'localhost',57638) bytes
```
The elements in the array passed to `fetch_intermediate_results` are the
same, but in the opposite order than expected.
To fix this flakiness, we can omit the `"SELECT bytes FROM
fetch_intermediate_results..."` line. From the following logs, it is
understandable that the intermediate results have been fetched.
Fix the flaky test that results in following diff by waiting until the
backend that we want to terminate really terminates, until 5secs.
```diff
--- /__w/citus/citus/src/test/regress/expected/isolation_get_all_active_transactions.out.modified 2023-11-01 16:30:57.648749795 +0000
+++ /__w/citus/citus/src/test/regress/results/isolation_get_all_active_transactions.out.modified 2023-11-01 16:30:57.656749877 +0000
@@ -114,13 +114,13 @@
--------------------
t
(1 row)
step s3-show-activity:
SET ROLE postgres;
select count(*) from get_all_active_transactions() where process_id IN (SELECT * FROM selected_pid);
count
-----
- 0
+ 1
(1 row)
```
Sometimes in CI we run into this failure:
```diff
SELECT resultId, nodeport, rowcount, targetShardId, targetShardIndex
FROM partition_task_list_results('test', $$ SELECT * FROM source_table $$, 'target_table')
NATURAL JOIN pg_dist_node;
-WARNING: connection to the remote node localhost:xxxxx failed with the following error: connection not open
+ERROR: connection to the remote node localhost:9060 failed with the following error: connection not open
SELECT * FROM distributed_result_info ORDER BY resultId;
- resultid | nodeport | rowcount | targetshardid | targetshardindex
----------------------------------------------------------------------
- test_from_100800_to_0 | 9060 | 22 | 100805 | 0
- test_from_100801_to_0 | 57637 | 2 | 100805 | 0
- test_from_100801_to_1 | 57637 | 15 | 100806 | 1
- test_from_100802_to_1 | 57637 | 10 | 100806 | 1
- test_from_100802_to_2 | 57637 | 5 | 100807 | 2
- test_from_100803_to_2 | 57637 | 18 | 100807 | 2
- test_from_100803_to_3 | 57637 | 4 | 100808 | 3
- test_from_100804_to_3 | 9060 | 24 | 100808 | 3
-(8 rows)
-
+ERROR: current transaction is aborted, commands ignored until end of transaction block
-- fetch from worker 2 should fail
SAVEPOINT s1;
+ERROR: current transaction is aborted, commands ignored until end of transaction block
SELECT fetch_intermediate_results('{test_from_100802_to_1,test_from_100802_to_2}'::text[], 'localhost', :worker_2_port) > 0 AS fetched;
-ERROR: could not open file "base/pgsql_job_cache/xx_x_xxx/test_from_100802_to_1.data": No such file or directory
-CONTEXT: while executing command on localhost:xxxxx
+ERROR: current transaction is aborted, commands ignored until end of transaction block
ROLLBACK TO SAVEPOINT s1;
+ERROR: savepoint "s1" does not exist
-- fetch from worker 1 should succeed
SELECT fetch_intermediate_results('{test_from_100802_to_1,test_from_100802_to_2}'::text[], 'localhost', :worker_1_port) > 0 AS fetched;
- fetched
----------------------------------------------------------------------
- t
-(1 row)
-
+ERROR: current transaction is aborted, commands ignored until end of transaction block
-- make sure the results read are same as the previous transaction block
SELECT count(*), sum(x) FROM
read_intermediate_results('{test_from_100802_to_1,test_from_100802_to_2}'::text[],'binary') AS res (x int);
- count | sum
----------------------------------------------------------------------
- 15 | 863
-(1 row)
-
+ERROR: current transaction is aborted, commands ignored until end of transaction block
ROLLBACk;
```
As outlined in the #7306 I created, the reason for this is related to
only having a single connection open to the node. Finding and fixing the
full cause is not trivial, so instead this PR starts working around
this bug by forcing maximum parallelism. Preferably we'd want
this workaround not to be necessary, but that requires
spending time to fix this. For now having a less flaky CI is
good enough.
Sometimes in CI insert_select_connection_leak would fail like this:
```diff
END;
SELECT worker_connection_count(:worker_1_port) - :pre_xact_worker_1_connections AS leaked_worker_1_connections,
worker_connection_count(:worker_2_port) - :pre_xact_worker_2_connections AS leaked_worker_2_connections;
leaked_worker_1_connections | leaked_worker_2_connections
-----------------------------+-----------------------------
- 0 | 0
+ -1 | 0
(1 row)
-- ROLLBACK
BEGIN;
INSERT INTO target_table SELECT * FROM source_table;
INSERT INTO target_table SELECT * FROM source_table;
ROLLBACK;
SELECT worker_connection_count(:worker_1_port) - :pre_xact_worker_1_connections AS leaked_worker_1_connections,
worker_connection_count(:worker_2_port) - :pre_xact_worker_2_connections AS leaked_worker_2_connections;
leaked_worker_1_connections | leaked_worker_2_connections
-----------------------------+-----------------------------
- 0 | 0
+ -1 | 0
(1 row)
\set VERBOSITY TERSE
-- Error on constraint failure
BEGIN;
INSERT INTO target_table SELECT * FROM source_table;
SELECT worker_connection_count(:worker_1_port) AS worker_1_connections,
worker_connection_count(:worker_2_port) AS worker_2_connections \gset
SAVEPOINT s1;
INSERT INTO target_table SELECT a, CASE WHEN a < 50 THEN b ELSE null END FROM source_table;
@@ -89,15 +89,15 @@
leaked_worker_1_connections | leaked_worker_2_connections
-----------------------------+-----------------------------
0 | 0
(1 row)
END;
SELECT worker_connection_count(:worker_1_port) - :pre_xact_worker_1_connections AS leaked_worker_1_connections,
worker_connection_count(:worker_2_port) - :pre_xact_worker_2_connections AS leaked_worker_2_connections;
leaked_worker_1_connections | leaked_worker_2_connections
-----------------------------+-----------------------------
- 0 | 0
+ -1 | 0
(1 row)
```
Source:
https://github.com/citusdata/citus/actions/runs/6718401194/attempts/1#summary-18258258387
A negative amount of leaked connectios is obviously not possible. For
some reason there was a connection open when we checked the initial
amount of connections that was closed afterwards. This could be the
from the maintenance daemon or maybe from the previous test that had not
fully closed its connections just yet.
The change in this PR doesnt't actually fix the cause of the negative
connection, but it simply considers it good as well, by changing the
result to zero for negative values.
With this fix we might sometimes miss a leak, because the negative
number can cancel out the leak and still result in a 0. But since the
negative number only occurs sometimes, we'll still find the leak often
enough.
Sometimes in CI our logical_replication test fails like this:
```diff
+++ /__w/citus/citus/src/test/regress/results/logical_replication.out.modified 2023-11-01 14:15:08.562758546 +0000
@@ -40,21 +40,21 @@
SELECT count(*) from pg_publication;
count
-------
0
(1 row)
SELECT count(*) from pg_replication_slots;
count
-------
- 0
+ 1
(1 row)
SELECT count(*) FROM dist;
count
-------
```
It's hard to understand what is going on here, just based on the wrong
number. So this PR changes the test to show the name of the
subscription, publication and replication slot to make finding the cause
easier.
In passing this also fixes another flaky test in the same file that our
flaky test detection picked up. This is done by waiting for resource
cleanup after the shard move.
Fixes the flaky test that results in following diff:
```diff
--- /__w/citus/citus/src/test/regress/expected/multi_mx_node_metadata.out.modified 2023-11-01 14:22:12.890476575 +0000
+++ /__w/citus/citus/src/test/regress/results/multi_mx_node_metadata.out.modified 2023-11-01 14:22:12.914476657 +0000
@@ -840,24 +840,26 @@
(1 row)
\c :datname - - :master_port
SELECT datname FROM pg_stat_activity WHERE application_name LIKE 'Citus Met%';
datname
------------
db_to_drop
(1 row)
DROP DATABASE db_to_drop;
+ERROR: database "db_to_drop" is being accessed by other users
SELECT datname FROM pg_stat_activity WHERE application_name LIKE 'Citus Met%';
datname
------------
-(0 rows)
+ db_to_drop
+(1 row)
-- cleanup
DROP SEQUENCE sequence CASCADE;
NOTICE: drop cascades to default value for column a of table reference_table
```
Sometimes in CI citus_non_blocking_split_shard_cleanup failed like this:
```diff
--- /__w/citus/citus/src/test/regress/expected/citus_non_blocking_split_shard_cleanup.out.modified 2023-11-01 15:07:14.280551207 +0000
+++ /__w/citus/citus/src/test/regress/results/citus_non_blocking_split_shard_cleanup.out.modified 2023-11-01 15:07:14.292551358 +0000
@@ -106,21 +106,22 @@
-----------------------------------
(1 row)
\c - - - :worker_2_port
SET search_path TO "citus_split_test_schema";
-- Replication slots should be cleaned up
SELECT slot_name FROM pg_replication_slots;
slot_name
---------------------------------
-(0 rows)
+ citus_shard_split_slot_19_10_17
+(1 row)
-- Publications should be cleanedup
SELECT count(*) FROM pg_publication;
count
```
It's expected that the replication slot is sometimes not cleaned up if
we don't wait until resource cleanup completes. This PR starts doing
that here.
Sometimes failure_split_cleanup failed in CI like this:
```diff
ERROR: server closed the connection unexpectedly
CONTEXT: while executing command on localhost:9060
SELECT operation_id, object_type, object_name, node_group_id, policy_type
FROM pg_dist_cleanup where operation_id = 777 ORDER BY object_name;
operation_id | object_type | object_name | node_group_id | policy_type
--------------+-------------+-----------------------------------------------------------+---------------+-------------
777 | 1 | citus_failure_split_cleanup_schema.table_to_split_8981000 | 1 | 0
- 777 | 1 | citus_failure_split_cleanup_schema.table_to_split_8981002 | 1 | 1
777 | 1 | citus_failure_split_cleanup_schema.table_to_split_8981002 | 2 | 0
+ 777 | 1 | citus_failure_split_cleanup_schema.table_to_split_8981002 | 1 | 1
777 | 1 | citus_failure_split_cleanup_schema.table_to_split_8981003 | 2 | 1
777 | 4 | citus_shard_split_publication_1_10_777 | 2 | 0
(5 rows)
-- we need to allow connection so that we can connect to proxy
```
Source:
https://github.com/citusdata/citus/actions/runs/6717642291/attempts/1#summary-18256014949
It's the common problem where we're missing a column in the ORDER BY
clause. This fixes that by adding an node_group_id to the query in
question.
Sometimes in CI isolation_master_update_node fails like this:
```diff
------------------
(1 row)
step s2-abort: ABORT;
step s1-abort: ABORT;
FATAL: terminating connection due to administrator command
FATAL: terminating connection due to administrator command
SSL connection has been closed unexpectedly
+server closed the connection unexpectedly
master_remove_node
------------------
```
This just seesm like a random error line. The only way to reasonably fix
this is by adding an extra output file. So that's what this PR does.
One of our most flaky and most anoying tests is
multi_cluster_management. It usually fails like this:
```diff
SELECT citus_disable_node('localhost', :worker_2_port);
citus_disable_node
--------------------
(1 row)
SELECT public.wait_until_metadata_sync(60000);
+WARNING: waiting for metadata sync timed out
wait_until_metadata_sync
--------------------------
(1 row)
```
This tries to address that by hardening wait_until_metadata_sync. I
believe the reason for this warning is that there is a race condition in
wait_until_metadata_sync. It's possible for the pre-check to fail, then
have the maintenance daemon send a notification. And only then have the
backend start to listen. I tried to fix it in two ways:
1. First run LISTEN, and only then read do the pre-check.
2. If we time out, check again just to make sure that we did not miss
the notification somehow. And don't show a warning if all metadata is
synced after the timeout.
It's hard to know for sure that this fixes it because the test is not
repeatable and I could not reproduce it locally. Let's just hope for the
best.
---------
Co-authored-by: Onur Tirtir <onurcantirtir@gmail.com>
I just enhanced the existing code to check if the relation is an index
belonging to a distributed table.
If so the shardId is appended to relation (index) name and the *_size
function are executed as before.
There is a change in an extern function:
`extern StringInfo GenerateSizeQueryOnMultiplePlacements(...)`
It's possible to create a new function and deprecate this one later if
compatibility is an issue.
Fixes https://github.com/citusdata/citus/issues/6496.
DESCRIPTION: Allows using Citus size functions on distributed tables
indexes.
---------
Co-authored-by: Onur Tirtir <onurcantirtir@gmail.com>
Sometimes validate constraint would fail like this:
```diff
validatable_constraint_8000016 | t
(10 rows)
DROP TABLE constrained_table;
+ERROR: deadlock detected
+DETAIL: Process 16602 waits for ShareRowExclusiveLock on relation 56258 of database 16384; blocked by process 16601.
+Process 16601 waits for AccessShareLock on relation 56120 of database 16384; blocked by process 16602.
+HINT: See server log for query details.
DROP TABLE referenced_table CASCADE;
DROP TABLE referencing_table;
DROP SCHEMA validate_constraint CASCADE;
-NOTICE: drop cascades to 3 other objects
+NOTICE: drop cascades to 4 other objects
DETAIL: drop cascades to type constraint_validity
drop cascades to view constraint_validations_in_workers
drop cascades to view constraint_validations
+drop cascades to table constrained_table
SET search_path TO DEFAULT;
```
Source:
https://github.com/citusdata/citus/actions/runs/6708383699?pr=7291
This change fixes that by not running together with the
foreign_key_to_reference_table test anymore. In passing it also
simplifies dropping of the test its resources.
There was a bug reported for previous versions of Citus where
shard\_size was returning NULL for tables with spaces in them. It works
fine on the main branch though, but I'm still adding a test for this to
the main branch because it seems a good test to have.
When testing rolling Citus upgrades, coordinator should not be upgraded
until we upgrade all the workers.
---------
Co-authored-by: Jelte Fennema-Nio <github-tech@jeltef.nl>
This was sometimes failing when running locally due to some local shard
still existing due to. This fixes that. We normally silence all
`drop schema cascade` output like this anyway to avoid unnecessary
diffs when modifying a test later on.
DESCRIPTION: Adds support for ALTER DATABASE <db_name> SET .. statement
propagation
SET statements in Postgres has a common structure which is already being
used in Alter Function
statement.
In this PR, I added a util file; citus_setutils and made it usable for
both for
alter database<db_name>set .. and alter function ... set ... statements.
With this PR, below statements will be propagated
```sql
ALTER DATABASE name SET configuration_parameter { TO | = } { value | DEFAULT }
ALTER DATABASE name SET configuration_parameter FROM CURRENT
ALTER DATABASE name RESET configuration_parameter
ALTER DATABASE name RESET ALL
```
Additionally, there was a bug in processing float values in the common
code block.
I fixed this one as well
Previous
```C
case T_Float:
{
appendStringInfo(buf, " %s", strVal(value));
break;
}
```
Now
```C
case T_Float:
{
appendStringInfo(buf, " %s", nodeToString(value));
break;
}
```
DESCRIPTION: Adds ALTER DATABASE WITH ... and REFRESH COLLATION VERSION
support
This PR adds supports for basic ALTER DATABASE statements propagation
support. Below statements are supported:
ALTER DATABASE <database_name> with IS_TEMPLATE <true/false>;
ALTER DATABASE <database_name> with CONNECTION LIMIT <integer_value>;
ALTER DATABASE <database_name> REFRESH COLLATION VERSION;
---------
Co-authored-by: Jelte Fennema-Nio <jelte.fennema@microsoft.com>
We currently don't support propagating these options in Citus
Relevant PG commits:
https://github.com/postgres/postgres/commit/e3ce2dehttps://github.com/postgres/postgres/commit/3d14e17
Limitation:
We also need to take care of generated GRANT statements by dependencies
in attempt to distribute something else. Specifically, this part of the
code in `GenerateGrantRoleStmtsOfRole`:
```
grantRoleStmt->admin_opt = membership->admin_option;
```
In PG16, membership also has `inherit_option` and `set_option` which
need to properly be part of the `grantRoleStmt`. We can skip for now
since #7164 will take care of this soon, and also this is not an
expected use-case.
Add citus_schema_move() that can be used to move tenant tables within a distributed
schema to another node. The function has two variations as simple wrappers around
citus_move_shard_placement() and citus_move_shard_placement_with_nodeid() respectively.
They pick a shard that belongs to the given tenant schema and resolve the source node
that contain the shards under given tenant schema. Hence their signatures are quite
similar to underlying functions:
```sql
-- citus_schema_move(), using target node name and node port
CREATE OR REPLACE FUNCTION pg_catalog.citus_schema_move(
schema_id regnamespace,
target_node_name text,
target_node_port integer,
shard_transfer_mode citus.shard_transfer_mode default 'auto')
RETURNS void
LANGUAGE C STRICT
AS 'MODULE_PATHNAME', $$citus_schema_move$$;
-- citus_schema_move(), using target node id
CREATE OR REPLACE FUNCTION pg_catalog.citus_schema_move(
schema_id regnamespace,
target_node_id integer,
shard_transfer_mode citus.shard_transfer_mode default 'auto')
RETURNS void
LANGUAGE C STRICT
AS 'MODULE_PATHNAME', $$citus_schema_move_with_nodeid$$;
```
Since in PG16, truncate triggers are supported on foreign tables, we add
the citus_truncate_trigger to Citus foreign tables as well, such that the TRUNCATE
command is propagated to the table's single local shard as well.
Note that TRUNCATE command was working for foreign tables even before this
commit: see https://github.com/citusdata/citus/pull/7170#issuecomment-1706240593 for details
This commit also adds tests with user-enabled truncate triggers on Citus foreign tables:
both trigger on the shell table and on its single foreign local shard.
Relevant PG commit:
https://github.com/postgres/postgres/commit/3b00a94
**Problem:**
Previously we always used an outside superuser connection to overcome
permission issues for the current user while propagating dependencies.
That has mainly 2 problems:
1. Visibility issues during dependency propagation, (metadata connection
propagates some objects like a schema, and outside transaction does not
see it and tries to create it again)
2. Security issues (it is preferrable to use current user's connection
instead of extension superuser)
**Solution (high level):**
Now, we try to make a smarter decision on whether should we use an
outside superuser connection or current user's metadata connection. We
prefer using current user's connection if any of the objects, which is
already propagated in the current transaction, is a dependency for a
target object. We do that since we assume if current user has
permissions to create the dependency, then it can most probably
propagate the target as well.
Our assumption is expected to hold most of the times but it can still be
wrong. In those cases, transaction would fail and user should set the
GUC `citus.create_object_propagation` to `deferred` to work around it.
**Solution:**
1. We track all objects propagated in the current transaction (we can
handle subtransactions),
2. We propagate dependencies via the current user's metadata connection
if any dependency is created in the current transaction to address
issues listed above. Otherwise, we still use an outside superuser
connection.
DESCRIPTION: Fixes some object propagation errors seen with transaction
blocks.
Fixes https://github.com/citusdata/citus/issues/6614
---------
Co-authored-by: Nils Dijk <nils@citusdata.com>
In PG16, REINDEX DATABASE/SYSTEM name is optional.
We already don't propagate these commands automatically.
Testing here with run_command_on_workers.
Relevant PG commit:
https://github.com/postgres/postgres/commit/2cbc3c1
When we create a database, it already needs to be manually created in
the workers as well.
This new icu_rules option should work as the other options as well.
Added a test for that.
Relevant PG commit:
https://github.com/postgres/postgres/commit/30a53b7
DESCRIPTION: Presenting citus_pause_node UDF enabling pausing by
node_id.
citus_pause_node takes a node_id parameter and fetches all the shards in
that node and puts AccessExclusiveLock on all the shards inside that
node. With this lock, insert is disabled, until citus_pause_node
transaction is closed.
---------
Co-authored-by: Hanefi Onaldi <Hanefi.Onaldi@microsoft.com>
DESCRIPTION: Adds grant/revoke propagation support for database
privileges
Following the implementation of support for granting and revoking
database privileges, certain tests that issued grants for worker nodes
experienced failures. These ones are fixed in this PR as well.
Naisila Puka
Onur Tirtir
Jelte Fennema-Nio
Cédric Villemain
Gürkan İndibay
aykut-bozkurt
Ivan Vyazmitinov