DESCRIPTION: This PR removes the task dependencies between shard moves
for which the shards belong to different colocation groups. This change
results in scheduling multiple tasks in the RUNNABLE state. Therefore it
is possible that the background task monitor can run them concurrently.
Previously, all the shard moves planned in a rebalance operation took
dependency on each other sequentially.
For instance, given the following table and shards
colocation group 1 colocation group 2
table1 table2 table3 table4 table 5
shard11 shard21 shard31 shard41 shard51
shard12 shard22 shard32 shard42 shard52
if the rebalancer planner returned the below set of moves
` {move(shard11), move(shard12), move(shard41), move(shard42)}`
background rebalancer scheduled them such that they depend on each other
sequentially.
```
{move(reftables) if there is any, none}
|
move( shard11)
|
move(shard12)
| {move(shard41)<--- move(shard12)} This is an artificial dependency
move(shard41)
|
move(shard42)
```
This results in artificial dependencies between otherwise independent
moves.
Considering that the shards in different colocation groups can be moved
concurrently, this PR changes the dependency relationship between the
moves as follows:
```
{move(reftables) if there is any, none} {move(reftables) if there is any, none}
| |
move(shard11) move(shard41)
| |
move(shard12) move(shard42)
```
---------
Co-authored-by: Jelte Fennema <jelte.fennema@microsoft.com>
Description:
Implementing CDC changes using Logical Replication to avoid
re-publishing events multiple times by setting up replication origin
session, which will add "DoNotReplicateId" to every WAL entry.
- shard splits
- shard moves
- create distributed table
- undistribute table
- alter distributed tables (for some cases)
- reference table operations
The citus decoder which will be decoding WAL events for CDC clients,
ignores any WAL entry with replication origin that is not zero.
It also maps the shard names to distributed table names.
Today we allow planning the queries that reference non-colocated tables
if the shards that query targets are placed on the same node. However,
this may not be the case, e.g., after rebalancing shards because it's
not guaranteed to have those shards on the same node anymore.
This commit adds citus.enable_non_colocated_router_query_pushdown GUC
that can be used to disallow planning such queries via router planner,
when it's set to false. Note that the default value for this GUC will be
"true" for 11.3, but we will alter it to "false" on 12.0 to not
introduce
a breaking change in a minor release.
Closes#692.
Even more, allowing such queries to go through router planner also
causes
generating an incorrect plan for the DML queries that reference
distributed
tables that are sharded based on different replication factor settings.
For
this reason, #6779 can be closed after altering the default value for
this
GUC to "false", hence not now.
DESCRIPTION: Adds `citus.enable_non_colocated_router_query_pushdown` GUC
to ensure generating a consistent distributed plan for the queries that
reference non-colocated distributed tables (when set to "false", the
default is "true").
Soon I will be doing some changes related to #692 in router planner
and those changes require updating ~5/6 tests related to router
planning. And to make those test files runnable by run_test.py
multiple times, we need to make some other tests (that they're
run in parallel / they badly depend on) ready for run_test.py too.
This would be useful for testing #6773. This is because, given that
#6773
only adds support for router / fast-path queries, theoretically almost
all
the tests that we have in that test file should work for null-shard-key
tables too (and they indeed do).
I deliberately did not replace multi_router_planner_fast_path.sql with
the one that I'm adding into arbitrary configs because we might still
want to see when we're able to go through fast-path planning for the
usual distributed tables (the ones that have a shard key).
DESCRIPTION: Check before logicalrep for rebalancer, error if needed
Check if we can use logical replication or not, in case of shard
transfer mode = auto, before executing the shard moves. If we can't,
error out. Before this PR, we used to error out in the middle of shard
moves:
```sql
set citus.shard_count = 4; -- just to get the error sooner
select citus_remove_node('localhost',9702);
create table t1 (a int primary key);
select create_distributed_table('t1','a');
create table t2 (a bigint);
select create_distributed_table('t2','a');
select citus_add_node('localhost',9702);
select rebalance_table_shards();
NOTICE: Moving shard 102008 from localhost:9701 to localhost:9702 ...
NOTICE: Moving shard 102009 from localhost:9701 to localhost:9702 ...
NOTICE: Moving shard 102012 from localhost:9701 to localhost:9702 ...
ERROR: cannot use logical replication to transfer shards of the relation t2 since it doesn't have a REPLICA IDENTITY or PRIMARY KEY
```
Now we check and error out in the beginning, without moving the shards.
fixes: #6727
ci/fix_styles.sh were complaining about `black` and `isort` packages are
not found even if I `pipenv install --dev` due to broken lock file. I
regenerated the lock file and now it works fine. We also wanted to
upgrade required python version for the pipfile.
Fixes#6672
2) Move all MERGE related routines to a new file merge_planner.c
3) Make ConjunctionContainsColumnFilter() static again, and rearrange the code in MergeQuerySupported()
4) Restore the original format in the comments section.
5) Add big serial test. Implement latest set of comments
This implements the phase - II of MERGE sql support
Support routable query where all the tables in the merge-sql are distributed, co-located, and both the source and
target relations are joined on the distribution column with a constant qual. This should be a Citus single-task
query. Below is an example.
SELECT create_distributed_table('t1', 'id');
SELECT create_distributed_table('s1', 'id', colocate_with => ‘t1’);
MERGE INTO t1
USING s1 ON t1.id = s1.id AND t1.id = 100
WHEN MATCHED THEN
UPDATE SET val = s1.val + 10
WHEN MATCHED THEN
DELETE
WHEN NOT MATCHED THEN
INSERT (id, val, src) VALUES (s1.id, s1.val, s1.src)
Basically, MERGE checks to see if
There are a minimum of two distributed tables (source and a target).
All the distributed tables are indeed colocated.
MERGE relations are joined on the distribution column
MERGE .. USING .. ON target.dist_key = source.dist_key
The query should touch only a single shard i.e. JOIN AND with a constant qual
MERGE .. USING .. ON target.dist_key = source.dist_key AND target.dist_key = <>
If any of the conditions are not met, it raises an exception.
(cherry picked from commit 44c387b978)
This implements MERGE phase3
Support pushdown query where all the tables in the merge-sql are Citus-distributed, co-located, and both
the source and target relations are joined on the distribution column. This will generate multiple tasks
which execute independently after pushdown.
SELECT create_distributed_table('t1', 'id');
SELECT create_distributed_table('s1', 'id', colocate_with => ‘t1’);
MERGE INTO t1
USING s1
ON t1.id = s1.id
WHEN MATCHED THEN
UPDATE SET val = s1.val + 10
WHEN MATCHED THEN
DELETE
WHEN NOT MATCHED THEN
INSERT (id, val, src) VALUES (s1.id, s1.val, s1.src)
*The only exception for both the phases II and III is, UPDATEs and INSERTs must be done on the same shard-group
as the joined key; for example, below scenarios are NOT supported as the key-value to be inserted/updated is not
guaranteed to be on the same node as the id distribution-column.
MERGE INTO target t
USING source s ON (t.customer_id = s.customer_id)
WHEN NOT MATCHED THEN - -
INSERT(customer_id, …) VALUES (<non-local-constant-key-value>, ……);
OR this scenario where we update the distribution column itself
MERGE INTO target t
USING source s On (t.customer_id = s.customer_id)
WHEN MATCHED THEN
UPDATE SET customer_id = 100;
(cherry picked from commit fa7b8949a8)
In #6720 I'm adding a `pytest` based testing framework. This adds the
dependencies for those. They have already been [merged into our docker
files][the-process-merge] in the the-process repo preparation for #6720.
But by not having them on our citus main branch it is impossible to
make changes to the Pipfile, because our CI Dockerfiles and master
are out of date.
Since #6720 will need some more discussion and might take a few more
weeks to be merged, this takes out the Pipfile changes. By merging this
PR we can unblock new Pipfile changes.
Unblocks and partially addresses #6766
[the-process-merge]: https://github.com/citusdata/the-process/pull/117
In the past, having columnar tables in the cluster was causing pg
upgrades to fail when attempting to access columnar metadata. This is
because, pg_dump doesn't see objects that we use for columnar-am related
booking as the dependencies of the tables using columnar-am.
To fix that; in #5456, we inserted some "normal dependency" edges (from
those objects to columnar-am) into pg_depend.
This helped us ensuring the existency of a class of metadata objects
--such as columnar.storageid_seq-- and helped fixing #5437.
However, the normal-dependency edges that we added for indexes on
columnar metadata tables --such columnar.stripe_pkey-- didn't help at
all because they were indeed causing dependency loops (#5510) and
pg_dump was not able to take those dependency edges into the account.
For this reason, this commit deletes those dependency edges so that
pg_dump stops complaining about them. Note that it's not critical to
delete those edges from pg_depend since they're not breaking pg upgrades
but were triggering some warning messages. And given that backporting
a sql change into older versions is hard a lot, we skip backporting
this.
This commit hides port numbers in upgrade_columnar_after because the
port numbers assigned to nodes in upgrade schedule differ from the ones
that flaky test detector assigns.
When run_test.py is run for an upgrade_.*_after.sql then, then
automatically run the corresponding uprade_.*_before.sql file first.
This is because all those upgrade_.*_after.sql files depend on the
objects created in upgrade_.*_before.sql files by definition.
So that we can run the tests that require fake_fdw by using minimal
schedule too.
Also move multi_create_fdw.sql up in multi_1_schedule to make it
available to more tests.
DESCRIPTION: Fixes a bug in shard copy operations.
For copying shards in both shard move and shard split operations, Citus
uses the COPY statement.
A COPY all statement in the following form
` COPY target_shard FROM STDIN;`
throws an error when there is a GENERATED column in the shard table.
In order to fix this issue, we need to exclude the GENERATED columns in
the COPY and the matching SELECT statements. Hence this fix converts the
COPY and SELECT all statements to the following form:
```
COPY target_shard (col1, col2, ..., coln) FROM STDIN;
SELECT (col1, col2, ..., coln) FROM source_shard;
```
where (col1, col2, ..., coln) does not include a GENERATED column.
GENERATED column values are created in the target_shard as the values
are inserted.
Fixes#6705.
---------
Co-authored-by: Teja Mupparti <temuppar@microsoft.com>
Co-authored-by: aykut-bozkurt <51649454+aykut-bozkurt@users.noreply.github.com>
Co-authored-by: Jelte Fennema <jelte.fennema@microsoft.com>
Co-authored-by: Gürkan İndibay <gindibay@microsoft.com>
DESCRIPTION: Adds logic to distribute unbalanced shards
If the number of shard placements (for a colocation group) is less than
the number of workers, it means that some of the workers will remain
empty. With this PR, we consider these shard groups as a colocation
group, in order to make them be distributed evenly as much as possible
across the cluster.
Example:
```sql
create table t1 (a int primary key);
create table t2 (a int primary key);
create table t3 (a int primary key);
set citus.shard_count =1;
select create_distributed_table('t1','a');
select create_distributed_table('t2','a',colocate_with=>'t1');
select create_distributed_table('t3','a',colocate_with=>'t2');
create table tb1 (a bigint);
create table tb2 (a bigint);
select create_distributed_table('tb1','a');
select create_distributed_table('tb2','a',colocate_with=>'tb1');
select citus_add_node('localhost',9702);
select rebalance_table_shards();
```
Here we have two colocation groups, each with one shard group. Both
shard groups are placed on the first worker node. When we add a new
worker node and try to rebalance table shards, the rebalance planner
considers it well balanced and does nothing. With this PR, the
rebalancer tries to distribute these shard groups evenly across the
cluster as much as possible. For this example, with this PR, the
rebalancer moves one of the shard groups to the second worker node.
fixes: #6715
DESCRIPTION: Correctly report shard size in citus_shards view
When looking at citus_shards, people are interested in the actual size
that all the data related to the shard takes up on disk.
`pg_total_relation_size` is the function to use for that purpose. The
previously used `pg_relation_size` does not include indexes or TOAST.
Especially the missing toast can have enormous impact on the size of the
shown data.
With this small change, arbitrary config tests can have multiple acceptable correct outputs.
For an arbitrary config tests named `t`, now you can define `expected/t.out`, `expected/t_0.out`, `expected/t_1.out` etc and the test will succeed if the output of `sql/t.sql` is equal to any of the `t.out` or `t_{0, 1, ...}.out` files.
First of all, this commit sets next_shard_id for
single_node_truncate.sql because shard ids in the test output were
changing whenever we modify a prior test file.
Then the flaky test detector started complaining about
single_node_truncate.sql. We fix that by specifying the correct
test dependency for it in run_test.py.
In #6718 I accidentally added Python type hint syntax that was only
supported on Python 3.10. Our CI uses 3.9, so this PR changes that to a
syntax that's supported on 3.9 too.
O Simple fix is to add ORDER BY to have definitive results.
O Add search_path explicitly after reconnecting, this avoids creating objects in public schema
which prevents us from repetitive running of tests.
O multi_mx_modification is not designed to run repetitive, so isolate it.
Some of our tests depend on previous tests. Normally all these tests
should be part of a base schedule, but that's not always the case. The
flaky test detection script should ensure that we don't introduce other
dependencies by accident in new tests. But we have many old tests that
are not worth the effort of changing. This adds a way to define such
test dependencies in `run_test.py`, so that it can make sure to run any
dependencies before the actual test.
Our repo was complaining about the cryptography package being
vulnerable. This updates it, including our mitmproxy fork, because that
was pinning an outdated version.
Relevant commit on our mitmproxy fork:
2fd18ef051
Relevant PR on the-process:
https://github.com/citusdata/the-process/pull/112
The failure_create_distributed_table_non_empty test would sometimes fail
like this:
```diff
-- in the first test, cancel the first connection we sent from the coordinator
SELECT citus.mitmproxy('conn.cancel(' || pg_backend_pid() || ')');
- mitmproxy
----------------------------------------------------------------------
-
-(1 row)
-
+ERROR: canceling statement due to user request
+CONTEXT: COPY mitmproxy_result, line 0
+SQL statement "COPY mitmproxy_result FROM '/home/circleci/project/src/test/regress/tmp_check/mitmproxy.fifo'"
+PL/pgSQL function citus.mitmproxy(text) line 11 at EXECUTE
SELECT create_distributed_table('test_table', 'id');
```
Source:
https://app.circleci.com/pipelines/github/citusdata/citus/30474/workflows/be1c9f9d-22c9-465c-964a-dcdd1cb8c99c/jobs/985441
Because the cancel command had no filter it would actually sometimes
cancel the mitmproxy cancel command itself. This PR addresses that by
simply removing this test.
This is basically the exact same issue as #6217, only in a different
place in the file. It's fixed here by removing the test since there's
already many different similar tests.
DESCRIPTION: Fix background rebalance when reference table has no PK
For the background rebalance we would always fail if a reference table
that was not replicated to all nodes would not have a PK (or replica
identity). Even when we used force_logical or block_writes as the shard
transfer mode. This fixes that and adds some regression tests.
Fixes#6680
We should disallow dropping table_name option if foreign table is in
metadata. Otherwise, we get table not found error which contains
shardid.
DESCRIPTION: Fixes an unexpected foreign table error by disallowing to drop the table_name option.
Fixes#6663
This change is a precursor to attempts to add more editorconfig rules in
our codebase. It is a good idea to comply with POSIX standards and have
an empty newline at the end of text files. However, once we have such a
rule, arbitrary configs scripts used to fail before this change.
Related: #5981
Fixes#6570.
In the past, having columnar tables in the cluster was causing pg
upgrades to fail when attempting to access columnar metadata. This is
because, pg_dump doesn't see objects that we use for columnar-am related
booking as the dependencies of the tables using columnar-am.
To fix that; in #5456, we inserted some "normal dependency" edges (from
those objects to columnar-am) into pg_depend.
This helped us ensuring the existency of a class of metadata objects
--such as columnar.storageid_seq-- and helped fixing #5437.
However, the normal-dependency edges that we added for indexes on
columnar metadata tables --such columnar.stripe_pkey-- didn't help at
all because they were indeed causing dependency loops (#5510) and
pg_dump was not able to take those dependency edges into the account.
For this reason, instead of inserting such dependency edges from indexes
to columnar-am, we allow columnar metadata accessors to fall-back to
sequential scan during pg upgrades.
Sometimes isolation_non_blocking_shard_split would fail like this:
```diff
step s2-show-pg_dist_cleanup:
SELECT object_name, object_type, policy_type FROM pg_dist_cleanup;
object_name |object_type|policy_type
------------------------------+-----------+-----------
+citus_shard_split_slot_2_10_39| 3| 0
public.to_split_table_1500001 | 1| 2
-(1 row)
+(2 rows)
```
Source:
https://app.circleci.com/pipelines/github/citusdata/citus/30237/workflows/edcf34b7-d7d3-4d10-8293-b6f59b00cdf2/jobs/970960
The reason is that replication slots have now become part of
pg_dist_cleanup too, and sometimes they cannot be cleaned up right away.
This is harmless as they will be cleaned up eventually. So this simply
filters out the replication slots for those tests.
Emel Şimşek
Marco Slot
Gokhan Gulbiz
Teja Mupparti
rajeshkt78
Onur Tirtir
Ahmet Gedemenli
aykut-bozkurt
Jelte Fennema
Gledis Zeneli
Jelte Fennema
Marco Slot
Hanefi Onaldi